Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926909.1_cds_XP_016474841.1_66826
CDS Infomation

[gene=LOC107796561] [db_xref=GeneID:107796561] [protein=glutamate receptor 2.8-like] [protein_id=XP_016474841.1] [location=join(16361..16643,17371..18710,18850..19162,19253..19659,19760..20299)] [gbkey=CDS]
Sequence

ATGCCAAATCCAAGATGCCATTTCCTGATTCTTTTGATGAAATTTGTCTCCATTATTTGC
TTTTGCCATTACATAATGCCAATAAGTGGTGAAGATGAAACTAACGCCGTTAAGAAGGTG
GATGTGGGTATAATTCTTGATCTGGAAACAAATGTGGCAAAAGTAATGCACACATGTATA
TTGCTAGCTCTTGAAGATTACCATGCCGCTAGTCGCAGTGCCATTAGGATAGTCCCTCAC
TTCAGGGATTCCAAGAAAGATGATGTTGAAGCAGCATCTGCTGCTATATCCTTGCTAAAG
GATGTCAAAGTGCAAGCTATCTTTGGGCCACAAATGTCTACACAAACTGATTTTGTGATT
GACATAGCGAAAAGAGCAGAAGTCCCAATCATTTCTCCAGCAACAAGTCCTTTACTTACA
GTCAAGGAACACCCCTACTTCATCAGAGCAGCACTTCCTTCTTCCAGCCAGACCAAGGCC
ATTGCAGCAATTGTTAGTAGATTTGATTGGAGGGAGGTTGTAGTCATATACGAGGATAGC
CCCTATGGAACTGGAATAGTTCCACATTTGAGTGATGCCTTACTAGAAAACAGCACTTTA
GTCTCATATAGAAGTGTTATCTCACCTTCAGCCAATGATGATCAAATCCTCAGAGAGCTT
TACAAGCTGAATACAATGCAGACTAGGATTTTCATCGTGCACTTGCAACCATCTCTTGCC
TCACGCCTTTTTCTCAAGGCAGAAGAGGCTGGAATGATGAGCGATGGATATGCATGGATC
ATCACAGATGTTCTAACGAGTCTTCTGGATTCGGTAAATCGTTCAGTGATTGAGTCATCA
ATGCAAGGTGTTCTTGGTATAAAGCCTTATGTTCCAAGATCAAATGAGCTTACCAATTTC
AACAAGAGATGGAGAAGGAGATTTCGCCAAGAGTATCCAGACATGGACACAGTAGAACTC
AATGTTTACGGGCTATGGGCGTATGATGGCGTCACAGCATTAGCAAAAGCAGTAGAGAAG
GTGGCTGGCACTGCTACCCCAAAATCCAACAAAGTAGACACTAGAGACAACTCAACGGAC
TTAGATGCACTTGGAACCTCAGAGTTGGGATCTTTGCTCATTGACTCTATGCAAAACATA
ACGCTAAAAACTGGACTAAGTGGTGATTTCCGTATCATTAATGGAGAATTGCAGCCATCC
CCATATCAGATTGTGAATATAATTGGGAAAGGAGAGAGAAGTATTGGATTCTGGACAGAG
ACGGATGGAATTTCCTATAAACTGAAGATGAATGGGAAAACAGCTAAGAGTAATAATAAG
AAACTAGGGACCATCTTTTGGCCCGGTGAATCTAATATTGTTCCGAGAGGCTGGGAAATA
CCCACAACCGGGAAGAAGTTAAGGATTGGCGTTCCTGTCAAAGGAGGGCTGGAGCAATTC
ATTAAAGTGGAAACAGATCCAAAAACAAAAGCAGTAACTGCAACTGGTTTCTGTGCAGAT
GTCTTCATAGAAGTTATCCAATCTTTGCCATATGCTGTCCCTTATGAATTTATTCCATTT
CGAATGCCGGATAGTCACACTAATCCAGACTATGATCATCTTGTTTACAAGATCTCTTCT
AAGGAATATGATGCAGTTGTAGGTGATGTGACCATTTCAGAGAGCCGATCCAAGAATGTG
GATTTCGCACTACCTTTTACAGAGTCGGGCATTTCTGCAGTTGTGCCAGTAAAGGATGAT
GAGAGAAAGAATGCTTGGATTTTCTTGAAACCTCTACAGAAAGAACTTTGGATAACAACT
GGAGCATTCTTCGTCTTCATTGGTTTTGTGGTTTGGGTACTCGAACACCGTGTAAACGAA
GAATTTCGAGGACCCAAACGCAAGCAAGTTGGGATGATATTCTGGTTTTCCTTTTCAACT
CTCGTTTTTGCTCACAAAGAGAGGGTAACAAGCAACTTAACAAGATTTGTGGTGATTGTG
TGGGCTTTCGTGGTGCTAGTACTGACATCAAGTTACACAGCCAGCTTAACATCTATGTTA
ACGGTGCAACAGCTACAACCTACTATAACAGACCTCAATGATCTCATCAAGAATGGAGAA
TATGTCGGGTACCAAAAAGGTTCCTTTGTCGAAGACATCTTGAAGCGCATGAAATTTGAC
AGCACCAAGCTTAGAAATTATAGCAAATTGGAAGAGTATAATGATGCCCTCTCGAGAGGA
AGTAAAAATGGAGGTGTTGGTGCAATTGTTGATGAACTACCTTATCTCAGACTCTTCCTC
AACAAGTACTGCGGGAAGTATATTATGATCGGCCCAACATACAAGACCGCTGGCTTTGGA
TTCGCATTTCCAAAAGGATCTCCATTGGTACCTGACGTCTCGAGAGCAGTCCTAAAGGTG
ATGGAGGGAGAGTTTATGAATAACATAATACAGAAATGGTTTGGGAATGAAACAGACTGT
CCAGAGAAAGATGGAATGGCTACAACATCTAGCCTCACGCTAGATAGTTTTAAGGGCCTT
TTCCTCATAGCTGGTGTATCAGCAAGTTCCGCTCTTCTCATATTCTTCCTCATCTTTCTT
TACCAGAACAGGGAAATCTTAGCCACTGATGATTCTATATGGCAAAAGCTTTCTGCTATA
GCAAAAGCCTTTGATGATGAGAAAGACAAACCTAATTCTAAGTCAGAAAATCCGGGCGAA
GGCAATGAAAGCCAAACGACTACACCGTTCGCAGCAAGTGCAGCTTCCCCAGAAATATTT
CCCAACCTTCCCTCACAAAGCCCAGAAACCAGAACTGCGTCGCCTCCAGATGAAGGCTTC
TCTACAACAGAACCTGGAACTCCACTTGAAGAAACCATTACAGAGGCAAATGAAGAGAGA
TGA

Peptide Sequence

PEP ID

XP_016474841.1
PEP Infomation

PREDICTED: glutamate receptor 2.8-like [Nicotiana tabacum]
Sequence

MPNPRCHFLILLMKFVSIICFCHYIMPISGEDETNAVKKVDVGIILDLETNVAKVMHTCI
LLALEDYHAASRSAIRIVPHFRDSKKDDVEAASAAISLLKDVKVQAIFGPQMSTQTDFVI
DIAKRAEVPIISPATSPLLTVKEHPYFIRAALPSSSQTKAIAAIVSRFDWREVVVIYEDS
PYGTGIVPHLSDALLENSTLVSYRSVISPSANDDQILRELYKLNTMQTRIFIVHLQPSLA
SRLFLKAEEAGMMSDGYAWIITDVLTSLLDSVNRSVIESSMQGVLGIKPYVPRSNELTNF
NKRWRRRFRQEYPDMDTVELNVYGLWAYDGVTALAKAVEKVAGTATPKSNKVDTRDNSTD
LDALGTSELGSLLIDSMQNITLKTGLSGDFRIINGELQPSPYQIVNIIGKGERSIGFWTE
TDGISYKLKMNGKTAKSNNKKLGTIFWPGESNIVPRGWEIPTTGKKLRIGVPVKGGLEQF
IKVETDPKTKAVTATGFCADVFIEVIQSLPYAVPYEFIPFRMPDSHTNPDYDHLVYKISS
KEYDAVVGDVTISESRSKNVDFALPFTESGISAVVPVKDDERKNAWIFLKPLQKELWITT
GAFFVFIGFVVWVLEHRVNEEFRGPKRKQVGMIFWFSFSTLVFAHKERVTSNLTRFVVIV
WAFVVLVLTSSYTASLTSMLTVQQLQPTITDLNDLIKNGEYVGYQKGSFVEDILKRMKFD
STKLRNYSKLEEYNDALSRGSKNGGVGAIVDELPYLRLFLNKYCGKYIMIGPTYKTAGFG
FAFPKGSPLVPDVSRAVLKVMEGEFMNNIIQKWFGNETDCPEKDGMATTSSLTLDSFKGL
FLIAGVSASSALLIFFLIFLYQNREILATDDSIWQKLSAIAKAFDDEKDKPNSKSENPGE
GNESQTTTPFAASAASPEIFPNLPSQSPETRTASPPDEGFSTTEPGTPLEETITEANEER

Transcript Sequence

Gene sequence data has not been registered.